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Multiprotein interactions during surface adsorption : a molecular dynamics study of lysozyme aggregation at a charged solid surface

机译:表面吸附过程中的多种蛋白质相互作用:溶菌酶在带电固体表面聚集的分子动力学研究

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摘要

Multiprotein adsorption of hen egg white lysozyme at a model charged ionic surface is studied using fully atomistic molecular dynamics simulations. Simulations with two, three, and five proteins, in various orientations with respect the surface, are performed over a 100 ns time scale. Mutated proteins with point mutations at the major (Arg128 and Arg125) and minor (Arg68) surface adsorption sites are also studied. The 100 ns time scale used is sufficient to observe protein translations, rotations, adsorption, and aggregation. Two competing processes of particular interest are observed, namely surface adsorption and protein-protein aggregation. At low protein concentration, the proteins first adsorb in isolation and can then reorientate on the surface to aggregate. At high concentration, the proteins aggregate in the solution and then adsorb in nonspecific ways. This work demonstrates the role of protein concentration in adsorption, indicates the residues involved in both types of interaction (protein-protein and protein-surface), and gives an insight into processes to be considered in the development of new functionalized material systems.
机译:使用完全原子的分子动力学模拟研究了鸡蛋清溶菌酶在带电模型表面上的多蛋白吸附。在100 ns的时间范围内,以相对于表面的不同方向对两种,三种和五个蛋白质进行了模拟。还研究了在主要(Arg128和Arg125)和次要(Arg68)表面吸附点具有点突变的突变蛋白。使用的100 ns时间刻度足以观察蛋白质的翻译,旋转,吸附和聚集。观察到两个特别令人感兴趣的竞争过程,即表面吸附和蛋白质-蛋白质聚集。在低蛋白质浓度下,蛋白质首先被隔离吸附,然后可以在表面重新定向以聚集。在高浓度下,蛋白质在溶液中聚集,然后以非特异性方式吸附。这项工作证明了蛋白质浓度在吸附中的作用,指出了参与两种相互作用类型(蛋白质-蛋白质和蛋白质-表面)的残基,并提供了对开发新型功能材料系统时要考虑的过程的见解。

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